This is pdfTeXk, Version 3.141592-1.40.3 (Web2C 7.5.6) (format=pdflatex 2007.5.18) 1 APR 2009 11:56 entering extended mode %&-line parsing enabled. **\input Chapter03.Rnw.tex ! Emergency stop. <*> \input Chapter03.Rnw.tex *** (job aborted, file error in nonstop mode) Here is how much of TeX's memory you used: 3 strings out of 94073 103 string characters out of 1162984 48804 words of memory out of 1500000 3390 multiletter control sequences out of 10000+50000 3640 words of font info for 14 fonts, out of 1200000 for 2000 645 hyphenation exceptions out of 8191 4i,0n,3p,1b,8s stack positions out of 5000i,500n,6000p,200000b,5000s ! ==> Fatal error occurred, no output PDF file produced!